The pmemd.cuda GPU Implementation
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Fast Implementation of the Nudged Elastic Band Method in AMBER

Automated docking refinement and virtual compound screening with absolute binding free energy calculations

Toward Fast and Accurate Binding Affinity Prediction with pmemdGTI: An Efficient Implementation of GPU-Accelerated Thermodynamic Integration.
Toward Fast and Accurate Binding Affinity Prediction with pmemdGTI: An Efficient Implementation of GPU-Accelerated Thermodynamic Integration

Nvidia Cuda Apps Jun27 11

The pmemd.cuda GPU Implementation

Full article: Solvated and generalised Born calculations differences using GPU CUDA and multi-CPU simulations of an antifreeze protein with AMBER

GPU-Accelerated All-atom Particle-Mesh Ewald Continuous Constant pH Molecular Dynamics in Amber

Automated docking refinement and virtual compound screening with absolute binding free energy calculations

Full article: Solvated and generalised Born calculations differences using GPU CUDA and multi-CPU simulations of an antifreeze protein with AMBER

AMBER14 & GPUs

Full article: Solvated and generalised Born calculations differences using GPU CUDA and multi-CPU simulations of an antifreeze protein with AMBER
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